SubtiBank SubtiBank
Version comparison:

2018-11-11 15:21:382025-05-24 08:00:55

description

unknown

putative SPBc2 prophage-derived 5'(3')-deoxyribonucleotidase

locus

BSU20270

BSU_20270

geneLength

516

519

ec

outlinks

bsu

BSU20270

BSU_20270

Gene

Coordinates

2,172,932 → 2,173,450

2,172,932 2,173,450

The protein

Protein family

ilvD/edd family (according to Swiss-Prot)

5'(3')-deoxyribonucleotidase family (with [[protein|YqfW]], according to UniProt)

Biological materials

Mutant

BKE20270 (Δ[[gene|yorS]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE20270 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATTACTTTTTTCATAAATT, downstream forward: _UP4_TAAAATATCTCATTTATCCA

BKK20270 (Δ[[gene|yorS]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK20270 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATTACTTTTTTCATAAATT, downstream forward: _UP4_TAAAATATCTCATTTATCCA

BKE20270 ([[gene|yorS]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE20270 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATTACTTTTTTCATAAATT, downstream forward: _UP4_TAAAATATCTCATTTATCCA

BKK20270 ([[gene|yorS]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK20270 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATTACTTTTTTCATAAATT, downstream forward: _UP4_TAAAATATCTCATTTATCCA

The protein

Paralogous protein(s)

[[this]]

The protein

Structure

[PDB|3BWV] (from Staphylococcus epidermidis, 40% identity)